Program blastn blastp blastx tblastn tblastx Database StChr8 CHR8 Illicium Callus and Labellum Pool Callus Closed Callus Open Labellum Acorus christophii Acorus liquorice DA Orchid-R DA Orchid Small Duck Orchid Dill Root cDNA Clarkia breweri Petal EST New Clarkia breweri Petal EST Clarkia breweri Petal EST 2 Snapdragon Flower EST Basil Gland EST Arabidopsis ESTs AGI Coding Sequences AGI Total Sequences Salk TDNA Knockouts Genbank Arabidopsis Ceres ESTs At Seeds ESTs Picea abies bark ESTs All Higher Plant Sequences Cereon LER sequence Tomato glands ESTs Spruce ESTs SW Gland ESTs S.Dani Gland ESTs EMX Gland ESTs hirsutum LA1777 trichome ESTs Lycopersicon pennellii trichome ESTs Petunia New Petunia Petunia2 SHCHR80202J04.txt
Enter sequence below in FASTA format Or load it from disk
Set subsequence: From To
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Database Genetic Codes (tblast[nx] only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
Other advanced options:
